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st: Conditional infile statements
From
Gordon Hughes <[email protected]>
To
[email protected]
Subject
st: Conditional infile statements
Date
Sun, 20 Nov 2011 12:40:48 +0000
I would like to read a *very* large dataset using conditional infile
statements. With some oversimplification the structure of the data
is as follows:
Line 1: type1 id 1 2 3 4 5
Line 2: type1 id 3 4 5 6 7
Line 3: type2 id ABC DEF FGH
Line 4: type1 id 5 6 7 8 9
Line 5: type3 id IJK 3 4 XYZ
...
The format of the data on each line is fixed but the formatting
varies according the value of the first variable on the line. For
practical purposes the data may be treated as having one line per
observation but with different variables recorded for the different
line types. There is no consistent pattern of the occurrence of
lines of different types.
In high level programming languages, SAS and some other languages it
is possible to read such data using the following generic code:
read str ltype @
if ltype=="type1" {read id str type var1-var5}
if ltype=="type2" {read id str type str char1 str char2 str char3}
if ltype=="type3" {read id str char4 var6 var7 str char5}
where the @ character holds the current line for re-reading. As far
as I can work out this is not possible, at least directly, in Stata.
In fact the problem is even worse than this description implies
because many of the variables have the form "123*" where 123 is a
value and "*" may or may not be present and indicates a flag or note.
There is a way of doing this but to my mind it is clumsy:
infix str sline 1-30 using ...
gen ltype=substr(sline, 1, 5)
gen var1=real(substr(sline, 6, 2)) if ltype=="type1"
....
The user-written routine -strparse- can also be deployed for free
format data, but again it involves the use of sub-string
manipulation. I cannot locate any other user-written routine which
provides a better way of doing this, but my -net search- terms may
not pick up the right keywords.
I would appreciate any suggestions as to a better way of doing this -
or should I just resign myself to writing the code required to parse
each line. (Incidentally, one reason for my reluctance to do this is
that it increases the maximum memory size required to hold the
initial pass through the data.)
Gordon Hughes
[email protected]
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