st: Differing results from LR-test for -sem- and -overid- for -reg3- and -ivreg2-

[Suyin Chang <suyinlchang@gmail.com>]

Dear statalist,

Still in my quest to find appropriate tests for overidentying
restriction for my nonrecursive simultaneous equation models, and as a
follow-up question to the great discussion lead by professor Antonakis
here in the list last year
(http://www.stata.com/statalist/archive/2013-07/msg00524.html), I got
an odd result that requires some insight from people more well versed
in the advanced mechanics of those estimations.

The same model, estimated with default standard error structure, with
2SLS (via -ivreg2-), 3SLS (via -reg3- plus -overid-) and MLE (via
-sem-) yields the following differing overidentifying restriction
tests results.

For the 2SLS estimation (via -ivreg2-):

   with -estat overid-
   eq1)
   Sargan statistic (overidentification test of all instruments):
     1.136
                                                      Chi-sq(1) P-val
=    0.2865
   eq2)
   Sargan statistic (overidentification test of all instruments):
     0.636
                                                      Chi-sq(1) P-val
=    0.4252
   with -overid-
   Number of equations : 2
   Total number of exogenous variables in system : 9
   Number of estimated coefficients : 16
   Hansen-Sargan overidentification statistic :     2.470
   Under H0, distributed as Chi-sq(2), pval = 0.2909


For 3SLS estimation (via -reg3- plus -overid-):

   Number of equations : 2
   Total number of exogenous variables in system : 9
   Number of estimated coefficients : 16
   Hansen-Sargan overidentification statistic :     1.964
   Under H0, distributed as Chi-sq(2), pval = 0.3745


For the MLE estimation (via -sem-):

   LR test of model vs. saturated: chi2(3)   =     12.30, Prob > chi2 = 0.0064


What sort of issue could cause such a different pattern of results?
What worries me a bit is that I usually prefer the MLE, but Stata does
not have any other overidentifying restrictions test besides the LR
chi2 against the saturated model, so to allow an additional proof.
Those results are quite disturbing specially because 3SLS is differing
from MLE.

Please, any insights will be very welcome. I can even send part of the
data to be tested, if someone is willing to double-check.

Thanks for your time,

Suyin



>From   John Antonakis <John.Antonakis@unil.ch>
>To   statalist@hsphsun2.harvard.edu
>Subject   Re: st: Goodness-of-fit tests after -gsem-
>Date   Sun, 14 Jul 2013 11:47:41 +0200
>________________________________
>
>Hi Jenny:
>
>The following may be interesting to you:
>
>Rhemtulla, M., Brosseau-Liard, P. É., & Savalei, V. 2012. When can categorical variables be >>treated as continuous? A comparison of robust continuous and categorical SEM estimation >methods under suboptimal conditions. Psychological Methods, 17(3): 354-373. If your substantive >results are similar I guess you could treat the variables as continuous, particularly if you have a >nonsignificant chi-square test. Though, at this time, I would always double check my results with >Mplus, which has a robust overid test. That will be so cool when Stata adds the overid statistic >for -gsem- and also for models estimated with vce(robust).
>
>Best,
>J.
>
>
>__________________________________________
>
>John Antonakis
>Professor of Organizational Behavior
>Director, Ph.D. Program in Management
>
>Faculty of Business and Economics
>University of Lausanne
>Internef #618
>CH-1015 Lausanne-Dorigny
>Switzerland
>Tel ++41 (0)21 692-3438
>Fax ++41 (0)21 692-3305
>http://www.hec.unil.ch/people/jantonakis
>
>Associate Editor
>The Leadership Quarterly
>__________________________________________
>
>On 13.07.2013 22:30, Bloomberg Jenny wrote:
>
>Hi John,
>
>That is very informative and helpful indeed. Thank you so much. I
>liked the Karl Joreskög anecdote.
>I've always had an impression that a chi-square test of sem is
>actually of little practical use because it always gives significant
>results when the sample size is rather large. So I used to ignore
>chi-squares and rather look at other goodness-of-fit indexes when
>using sem.
>I will also look into your articles.
>
>In the meanwhile, could I ask you two more related questions?:
>(1) For now, chi-square statistics is not available with non-linear
>gsem. Then, to what extent do you think it makes sense to refer to the
>result of chi-square statistics of corresponding linear sem, that is
>to assume all the relevant variables are continuous (belonging to
>Gaussian family with Identity link) when they are actually not?
>Of course it depends on how the actual (g)sem model would look like,
>but let's now think of a very simple case, say, a measurement model
>with three binary outcomes x1-x3 and a latent variable L which
>measures x1-x3. If you use -gsem- and correctly specify -x1 x2 x3<-L,
>logit-, then you won't be able to obtain a chi-square statistics.
>However, if you "relax" the non-linearity and let x1-x3 pretend to be
>continuous variables, then you can obtain a chi-square statistics by
>using -sem-. My question is that what kind of implications on the
>actual non-linear (binary) model, if any, could we draw from thus
>obtained chi-square.
>
>(2) Suppose we submit to a journal a paper in which stata's gsem was
>developed. Then how do you think could/should the referee judge the
>paper, that is, judge if the model makes sense etc, without a
>chi-square test (or any other indexes)? (yes, I'm assuming that the
>Yuan-Bentler style chi-square test you mentioned is yet to be
>implemented at that time.) I guess researchers won't feel like using
>stata's gsem before this point is resolved.
>
>
>Best,
>Jenny
>
>
>
>2013/7/13 John Antonakis <John.Antonakis@unil.ch>:
>
>Hi Jenny:
>
>At this time, and based on my asking the Tech. support people at Stata, the
>overidentification test (and here I mean the likelihood ratio test, or
>chi-square test) is not available for -gsem-, which is unfortunate, but
>understandable. This is only version 2 of -sem- and the program is really
>very advanced as compared to other programs when they were on version 2
>(AMOS will is on version a zillion still can't do gsem, for example). From
>what tech. support told me, it is on the wishlist and hopefully we will have
>a Yuan-Bentler style chi-square test for models estimated by gsem, like
>Mplus does.
>
>As for assessing fit, you only need the chi-square test--indexes like RMSEA
>or CFI don't help at all. I elaborate below on an edited version of what I
>had written recently on SEMNET on this point (in particular see the anecdote
>about Karl Joreskog, who as you may know, was instrumental in developing
>SEM, about why approximate fit indexes were invented):
>
>"At the end of the day, science is self-correcting and with time, most
>researchers will gravitate towards some sort of consensus. I think that what
>will prevail are methods that are analytically derived (e.g., chi-square
>test and corrections to it for when it is not well behaved) and found to
>have support too via Monte Carlo. With respect to the latter, what is
>funny--well ironic and hypocritical too--is that measures of approximate fit
>are not analytically derived and the only support that they have is via what
>I would characterize as weak Monte Carlo's--which in turn are often summary
>dismissed---by the very people who use ignore the chi-square test--when the
>Monte Carlos provide evidence for the chi-square test.
>
>We have the following issues that need to be correctly dealt with to ensure
>the model passes the chi-square test (and also that inference is
>correct--i.e., with respect to standard errors):
>
>1. low sample size to parameters estimated ratio (need to correct the
>chi-square)
>2. non-multivariate normal data (need to correct the chi-square)
>3. non-continuous measures (need to use appropriate estimator)
>4. causal heterogeneity (need to control for sources of variance that render
>relations heterogenous)*
>5. bad measures
>6. incorrectly specified model (i.e., the causal structure reflects reality
>and all threats to endogeneity are dealt with).
>
>Any of these or a combination of these can make the chi-square test fail.
>Now, some researchers shrug, in a defeatist kind of way and say, "well I
>don't know why my model failed the chi-square test, but I will interpret it
>in any case because the approximate fit indexes [like RMSEA or CFI] say it
>is OK." Unfortunately, the researcher will not know to what extent these
>estimates may be misleading or completely wrong. And, reporting misleading
>estimates is, I think unethical and uneconomical for society. That is why
>all efforts should be made to develop measures and find models that fit. At
>this time the best test we have is the chi-square test; we can also localize
>misfit via score tests or modification indexes. I will rejoice the day we
>find better and stronger tests; however, inventing weaker tests is not going
>to help us.
>
>Again, here is a snippet from Cam McIntosh's (2012) recent paper on this
>point:
>
>"A telling anecdote in this regard comes from Dag Sorböm, a long-time
>collaborator of Karl Joreskög, one of the key pioneers of SEM and creator of
>the LISREL software package. In recounting a LISREL workshop that he jointly
>gave with Joreskög in 1985, Sorböm notes that: ‘‘In his lecture Karl would
>say that the Chi-square is all you really need. One participant then asked
>‘Why have you then added GFI [goodness-of-fit index]?’ Whereupon Karl
>answered ‘Well, users threaten us saying they would stop using LISREL if it
>always produces such large Chi-squares. So we had to invent something to
>make people happy. GFI serves that purpose’ (p. 10)’’.
>
>With respect to the causal heterogeneity point, according to Mulaik and
>James (1995, p. 132), samples must be causally homogenous to ensure that
>‘‘the relations among their variable attributes are accounted for by the
>same causal relations.’’ As we say in our causal claims paper (Antonakis et
>al, 2010), "causally homogenous samples are not infinite (thus, there is a
>limit to how large the sample can be). Thus, finding sources of population
>heterogeneity and controlling for it will improve model fit whether using
>multiple groups (moderator models) or multiple indicator, multiple causes
>(MIMIC) models" (p. 1103). This issues is something that many applied
>researchers fail to understand and completely ignore.
>
>References:
>*Antonakis J., Bendahan S., Jacquart P. & Lalive R. (2010). On making causal
>claims: A review and recommendations. The Leadership Quarterly, 21(6),
>1086-1120.
>
>Bera, A. K., & Bilias, Y. (2001). Rao's score, Neyman's C(α) and Silvey's LM
>tests: an essay on historical developments and some new results. Journal of
>Statistical Planning and Inference, 97(1), 9-44.
>
>*Bollen, K. A. 1989. Structural equations with latent variables. New York:
>Wiley.
>
>*James, L. R., Mulaik, S. A., & Brett, J. M. 1982. Causal Analysis:
>Assumptions, Models, and Data. Beverly Hills: Sage Publications.
>
>*Joreskog, K. G., & Goldberger, A. S. 1975. Estimation of a model with
>multiple indicators and multiple causes of a single latent variable. Journal
>of the American Statistical Association, 70(351): 631-639.
>
>McIntosh, C. (2012). Improving the evaluation of model fit in confirmatory
>factor analysis: A commentary on Gundy, C.M., Fayers, P.M., Groenvold, M.,
>Petersen, M. Aa., Scott, N.W., Sprangers, M.A.J., Velikov, G., Aaronson,
>N.K. (2011). Comparing higher-order models for the EORTC QLQ-C30. Quality of
>Life Research. Quality of Life Research, 21(9), 1619-1621.
>
>*Muthén, B. O. 1989. Latent variable modeling in heterogenous populations.
>Psychometrika, 54(4): 557-585.
>
>*Mulaik, S. A. & James, L. R. 1995. Objectivity and reasoning in science and
>structural equation modeling. In R. H. Hoyle (Ed.), Structural Equation
>Modeling: Concepts, Issues, and Applications: 118-137. Thousand Oaks, CA:
>Sage Publications.
>
>And, here are some examples from my work where the chi-square test was
>passed (and the first study had a rather large sample)--so I don't live in a
>theoretical statistical bubble:
>
>http://dx.doi.org/10.1177/0149206311436080
>http://dx.doi.org/10.1016/j.paid.2010.10.010
>
>Best,
>J.
>
>P.S. Take a look at the following posts too by me on these points on
>Statalist.
>
>http://www.stata.com/statalist/archive/2013-04/msg00733.html
>http://www.stata.com/statalist/archive/2013-04/msg00747.html
>http://www.stata.com/statalist/archive/2013-04/msg00765.html
>http://www.stata.com/statalist/archive/2013-04/msg00767.html
>
>__________________________________________
>
>John Antonakis
>Professor of Organizational Behavior
>Director, Ph.D. Program in Management
>
>Faculty of Business and Economics
>University of Lausanne
>Internef #618
>CH-1015 Lausanne-Dorigny
>Switzerland
>Tel ++41 (0)21 692-3438
>Fax ++41 (0)21 692-3305
>http://www.hec.unil.ch/people/jantonakis
>
>Associate Editor
>The Leadership Quarterly
>__________________________________________
>
>
>On 13.07.2013 08:41, Bloomberg Jenny wrote:
>
>Hello,
>
>I have a question about goodness-of-fit tests with gsem. (I don't have
>any specific models in mind; it's a general question.)
>
>I'm now reading the Stata 13 manual, and noticed that postestimation
>commands such as -estat gof-, -estat ggof-, and -estat eqgof- can only
>be used after -sem-, and not after -gsem-. This means that
>goodness-of-fit statistics like RMSEA cannot be obtained when you use
>gsem.
>
>Then, how can I test goodness-of-fit if I use -gsem- to analyse a
>non-linear, generalized SEM with latent variables?
>
>I know that AIC and BIC are still available after -gsem- (by -ic-
>option), but they are not for judging fit in absolute terms but for
>comparing the fit of different models. What I'd like to know is if
>there are any practical ways to judge the goodness-of-fit of the model
>in absolute terms.
>
>Any suggestions will be greatly appreciated.
>
>
>Best,
>Jenny
>*
>* For searches and help try:
>* http://www.stata.com/help.cgi?search
>* http://www.stata.com/support/faqs/resources/statalist-faq/
>* http://www.ats.ucla.edu/stat/stata/
>
>*
>*   For searches and help try:
>*   http://www.stata.com/help.cgi?search
>*   http://www.stata.com/support/faqs/resources/statalist-faq/
>*   http://www.ats.ucla.edu/stat/stata/

>*
>*   For searches and help try:
>*   http://www.stata.com/help.cgi?search
>*   http://www.stata.com/support/faqs/resources/statalist-faq/
>*   http://www.ats.ucla.edu/stat/stata/
>
>*
>*   For searches and help try:
>*   http://www.stata.com/help.cgi?search
>*   http://www.stata.com/support/faqs/resources/statalist-faq/
>*   http://www.ats.ucla.edu/stat/stata/

*
*   For searches and help try:
*   http://www.stata.com/help.cgi?search
*   http://www.stata.com/support/faqs/resources/statalist-faq/
*   http://www.ats.ucla.edu/stat/stata/