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st: Survival Analysis estat phtest with very large sample size--need help
From
prymkiewicz <[email protected]>
To
[email protected]
Subject
st: Survival Analysis estat phtest with very large sample size--need help
Date
Thu, 5 Dec 2013 18:26:26 -0800 (PST)
Hi,
I need a bit of help.
I am doing a survival analysis on a large population ~435732 people. I have
been testing the PH assumption using estat phtest and schoenfled residuals.
I believe that the large sample size is causing the phtest indicate evidence
against the PH assumption while the schoenfeld plot would indicate that the
model variables adheres to the PH assumption. I have included the global and
individual variable tests, as well as the plot for one of our variables
(mets). Could you let me know the cause of this and could you let me know if
there are alternative methods or references in literature acknowledging the
phtest and alternative methods for very large study populations.
Thanks,
Peter
. estat phtest, detail
Test of proportional-hazards assumption
Time: Time
----------------------------------------------------------------
| rho chi2 df Prob>chi2
------------+---------------------------------------------------
male | 0.01247 11.18 1 0.0008
age | 0.05331 252.06 1 0.0000
0b.urban | . . 1 .
1.urban | -0.01640 19.44 1 0.0000
99.urban | -0.00225 0.36 1 0.5472
1b.quintile | . . 1 .
2.quintile | -0.00620 2.74 1 0.0976
3.quintile | -0.00745 3.98 1 0.0461
4.quintile | -0.00025 0.00 1 0.9457
5.quintile | -0.00311 0.70 1 0.4039
99.quintile | -0.00119 0.10 1 0.7499
mi_1 | -0.00795 4.63 1 0.0314
chf_1 | -0.02492 47.01 1 0.0000
pvd_1 | 0.00206 0.32 1 0.5734
cevd_1 | -0.02076 32.80 1 0.0000
dem_1 | 0.00630 3.05 1 0.0807
copd_1 | -0.01545 17.10 1 0.0000
rheum_1 | -0.00840 5.06 1 0.0245
pub_1 | -0.00712 3.67 1 0.0553
mildld_1 | -0.00959 6.59 1 0.0102
diab_uc_1 | -0.02159 34.32 1 0.0000
diab_c_1 | 0.01731 21.99 1 0.0000
para_1 | -0.01532 17.14 1 0.0000
rd_1 | -0.03307 82.48 1 0.0000
cancer_1 | -0.03237 72.39 1 0.0000
mlsd_1 | -0.00246 0.43 1 0.5099
mets_1 | -0.06236 272.50 1 0.0000
hiv_1 | -0.00863 5.31 1 0.0213
------------+---------------------------------------------------
global test | 1392.71 26 0.0000
----------------------------------------------------------------
<http://statalist.1588530.n2.nabble.com/file/n7580460/phtest_plot_mets_1.jpg>
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