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st: RE: indicator variables from -by-
From
Joe Canner <[email protected]>
To
"[email protected]" <[email protected]>
Subject
st: RE: indicator variables from -by-
Date
Mon, 26 Aug 2013 17:08:03 +0000
Laszlo,
My guess is that -bys- takes good advantage of the sorting. In fact, you are not allowed to run -by- without -sort-, probably because doing so would ruin the optimization.
To illustrate, try the following:
gen obs=_n
sum AGE if inrange(obs,1000000,2000000)
and
sum AGE in 1000000/2000000
In my test (with a dataset of almost 8 millions observations), the former (not including -gen-) took 20x longer than the latter. Similarly, the -bys- code presumably accesses all observations in a particular level of the by variable more-or-less by observation number, rather than by -if- testing. (I think Nick Cox alluded to this a while back.)
Regards,
Joe Canner
Johns Hopkins School of Medicine
-----Original Message-----
From: [email protected] [mailto:[email protected]] On Behalf Of László Sándor
Sent: Sunday, August 25, 2013 11:55 AM
To: [email protected]
Subject: st: indicator variables from -by-
Hi,
I have so many observations that even the byte tempvars of
-marksample- might make me run out of memory.
But -by- must be inefficient in this, as if you -bys- over many groups (e.g. households), you never run out of memory because a new touse tempvar was created for each group.
Thus I don't understand why this wrapper for -sum, meanonly- (just to collect saved results lost otherwise) runs out of copious amounts of memory (bying over 20 groups) while the -bys: sum, meanonly- is still much, much faster than any tabbing or tabstating or statsbying or Mata alternative. What does -by- handle differently about the latter what it cannot do with the former?
prog mymns, byable(recall, noheader)
syntax [varlist] [if] [in]
marksample touse
sum `varlist' if `touse', mean
mat A=nullmat(A)\r(mean)
end
Thanks,
Laszlo
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