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From | David Hoaglin <dchoaglin@gmail.com> |
To | statalist@hsphsun2.harvard.edu |
Subject | Re: st: Dear All--I am trying to graph Conditional Quantile Function as a bar chart? Is there any way I can add the St.Err as a cap in bar chart for stata? Thanks--Hossein |
Date | Mon, 20 May 2013 07:55:32 -0400 |
Dear Hossein, Your question is closely related to a thread that started on May 8. I'll quote my initial advice in that discussion and then quote comments from Nick Cox. The link ending in "Poster3.pdf" is a good 1-page discussion of reasons for not making such plots. David Hoaglin My initial advice: A good first step would be to omit the bars entirely. Freeman et al. (2008) discuss that type of plot under the name "dynamite plunger plot" in their chapter "How to display data badly." The bars take up space to no good purpose. A more effective plot would show the estimates with error bars or confidence intervals (and an explanation of whether the intervals are error bars or confidence intervals). David Hoaglin Freeman JV, Walters SJ, Campbell MJ (2008). How to Display Data. BMJ Books. The comments from Nick Cox: I agree strongly with David. I think I heard the term "detonator plots" from Stata user and Statalist member Paul Seed at a users' meeting several years ago. He may care to comment on whether it's his coinage. Independently of that, and echoing David, it's my impression that the term "dynamite plot" is more common. Naturally what you call the beast is not central here, but it is germane in so far as searching for "dynamite plot" on the internet yields good discussions such as http://biostat.mc.vanderbilt.edu/twiki/pub/Main/TatsukiRcode/Poster3.pdf The key issues are (to me) 1. Such plots omit detail which you should care about showing (when it's your data) or examining (always). 2. The visual signal strongly emphasises mean values relative to zero, by the solid or thick bars, and plays down uncertainty, shown by the intervals. Comparison with zero can be an important comparison, but it's often not of scientific interest or concern. A much more informative display is available through (e.g.) -stripplot- (SSC) which allows error bars to be shown with raw data. In terms of what Ronnie wants to do in Stata, his question is puzzling, because the UCLA FAQ he cites explains in detail that -graph bar- is a dead end here and you must switch to -twoway bar-. Nick njcoxstata@gmail.com * * For searches and help try: * http://www.stata.com/help.cgi?search * http://www.stata.com/support/faqs/resources/statalist-faq/ * http://www.ats.ucla.edu/stat/stata/