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st: New version of -somersd- on SSC
From
"Roger B. Newson" <[email protected]>
To
"[email protected]" <[email protected]>
Subject
st: New version of -somersd- on SSC
Date
Wed, 06 Jun 2012 11:27:07 +0100
Thanks as always to the services of Kit Baum, who seems on this occasion
to have updated SSC when absent from Boston, a new version of the
-somersd- is now available for download from SSC. In Stata, use the
-ssc- command to do this, or -adoupdate- if you already have an old
version of -somersd-.
The -somersd- package is described as below on my website. The new
version has been updated to Stata Version 12. It also fixes a
rarely-encountered bug, which caused -somersd- to fail when Somers' D
was calculated as being slightly greater than 1 or slightly less than
-1, as in 1+1e-16 or -1-1e-16. This occasionally used to happen when
sampling probability weights were used, in spite of using double or
quadruple precision in Mata. The new version rounds values of Somers' D
down to 1 if greater than 1 or up to -1 if less than -1, so the bug is
now fixed. I would like to thank Kerry Kammire of Stata Technical
Support for her very helpful advice that fixing Mata bugs in a .mlib
file necessitates either a version upgrade or access to an earlier
version of Stata.
Users of earlier versions of Stata can still download the Stata Version
5, 6, 9 or 10 versions of -somersd- from my website by typing, in Stata,
net from "http://www.imperial.ac.uk/nhli/r.newson/"
and selecting the subdirectory for the most recent Stata version
compatible with their own, and installing the appropriate version of
-somersd-.
Best wishes
Roger
--
Roger B Newson BSc MSc DPhil
Lecturer in Medical Statistics
Respiratory Epidemiology and Public Health Group
National Heart and Lung Institute
Imperial College London
Royal Brompton Campus
Room 33, Emmanuel Kaye Building
1B Manresa Road
London SW3 6LR
UNITED KINGDOM
Tel: +44 (0)20 7352 8121 ext 3381
Fax: +44 (0)20 7351 8322
Email: [email protected]
Web page: http://www.imperial.ac.uk/nhli/r.newson/
Departmental Web page:
http://www1.imperial.ac.uk/medicine/about/divisions/nhli/respiration/popgenetics/reph/
Opinions expressed are those of the author, not of the institution.
-------------------------------------------------------------------------------------
package somersd from http://www.imperial.ac.uk/nhli/r.newson/stata12
-------------------------------------------------------------------------------------
TITLE
somersd: Kendall's tau-a, Somers' D and percentile slopes
DESCRIPTION/AUTHOR(S)
The somersd package contains the programs somersd, censlope and
cendif,
which calculate confidence intervals for a range of parameters behind
rank or "nonparametric" statistics. somersd calculates confidence
intervals for generalized Kendall's tau-a or Somers' D parameters,
and stores the estimates and their covariance matrix as
estimation results.
It can be used on left-censored, right-censored, clustered and/or
stratified data. censlope is an extended version of somersd,
which also
calculates confidence limits for the generalized Theil-Sen median
slopes
(or other percentile slopes) corresponding to the version of
Somers' D
or Kendall's tau-a estimated. cendif is an easy-to-use program to
calculate confidence intervals for Hodges-Lehmann median differences
(or other percentile differences) between two groups. The somersd
package
can be used to calculate confidence intervals for a wide range of
rank-based parameters, which are special cases of Kendall's tau-a,
Somers' D or percentile slopes. These parameters include differences
between proportions, Harrell's c index, areas under receiver
operating
characteristic (ROC) curves, differences between Harrell's c
indices or
ROC areas, Gini coefficients, population attributable risks, median
differences, ratios, slopes and per-unit ratios, and the parameters
behind the sign test and the Wilcoxon-Mann-Whitney or Breslow-Gehan
ranksum tests. Full documentation of the programs (including
methods and
formulas) can be found in the manual files somersd.pdf,
censlope.pdf and
cendif.pdf, which can be viewed using the Adobe Acrobat Reader.
Author: Roger Newson
Distribution-date: 30may2012
Stata-version: 12
INSTALLATION FILES (click here to install)
cendif.ado
censlope.ado
somers_p.ado
somersd.ado
_bcsf_bisect.mata
_bcsf_bracketing.mata
_bcsf_regula.mata
_bcsf_ridders.mata
_blncdtree.mata
_somdtransf.mata
_u2jackpseud.mata
_v2jackpseud.mata
blncdtree.mata
tidot.mata
tidottree.mata
lsomersd.mlib
cendif.sthlp
censlope.sthlp
censlope_iteration.sthlp
mf_bcsf_bracketing.sthlp
mf_blncdtree.sthlp
mf_somdtransf.sthlp
mf_u2jackpseud.sthlp
somersd.sthlp
somersd_mata.sthlp
ANCILLARY FILES (click here to get)
cendif.pdf
censlope.pdf
somersd.pdf
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(click here to return to the previous screen)
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