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st: ANOVA Posthocs


From   "Ploutz-Snyder, Robert (JSC-SK)[USRA]" <[email protected]>
To   "[email protected]" <[email protected]>
Subject   st: ANOVA Posthocs
Date   Fri, 22 Oct 2010 13:53:40 -0500

Greetings Statalisters.

I am working on a multiple comparison problem comparing Y by Group with 4 groups, but I have MULTIPLE Y's that I need to consider because my Y's represent fold-increases in gene expression data and I'm working with over 40 genes...

So in this effort, I'd like to run Oneway ANOVAs of Y by Group for each of my genes, capture the Pairwise comparisons among my groups into a separate dataset, and repeat this with a loop for each of the genes of interest.

Ideally I'd like to use the Tukey-Kramer Pairwise user-written command (thanks Phil Enders), however that does not provide p-values in the screen output or any matrix in the return list.

An alternative would be to use the Scheffe posthoc option to -oneway- but I can't figure out how to steal those p-values either?

Any thoughts on how to grab these p-values?
Much appreciated...
Rob

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