I am having difficulty with the "genhw" command
With this simple dataset:
allele1 allele2
A A
A G
A A
A G
A A
A A
I issue the following command:
. genhw allele1 allele2
and get this result (in red)
',' found where integer expected
I set trace on and it seems to be blowing up in "genhwi" -- here is a snip
from the trace file
- genhwi `vars', `labopt' `binvar'
= genhwi 4 2, label(AA AG)
----------------------------------------------------------------------------
------------------- begin genhwi ---
- version 6
- qui {
- gettoken AA 0 : 0, parse(" ,")
- gettoken Aa 0 : 0, parse(" ,")
- gettoken aa 0 : 0, parse(" ,")
- confirm integer number `AA'
= confirm integer number 4
- confirm integer number `Aa'
= confirm integer number 2
- confirm integer number `aa'
= confirm integer number ,
',' found where integer expected
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