Hello,
I searched the
archives for an answer to this question, but was unsuccessful. Sorry if
it's been discussed before. I'm trying to test my case-control data to
confirm they're in Hardy-Weinberg equilibrium. I can use genhw for SNPs,
but I have a few multiallelic loci. I've seen various other packages which
seem to use a method proposed by Guo and Thompson (using Markov chain methods?),
but they require extra effort to get the data into a format for those packages
to work. I'm wondering if anyone has developed programs for this method
within Stata? Or is there another method which is preferred for testing
HWE for multiallelic loci that I should know about? Thanks in
advance.
