Two questions related to the estimation of haplotypes from genotype data
from phase uncertainty:
1. Schaid (Am J Hum Gen 2002) proposed the use of the score test for
assessing the association between haplotype data estimated using the
EM-algorithm and any given trait assessed in the same subject. Does Stata
allow to perform a Score test?
2. Is there any way to perform the such Score test using the command
qhapipf?